PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GSMUA_Achr1P27010_001
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
Family bHLH
Protein Properties Length: 226aa    MW: 25220.6 Da    PI: 8.7309
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GSMUA_Achr1P27010_001genomeCIRADView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.76.3e-1160108355
                            HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                    HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                             +h+ +Er RR++i +++  L++l+P +    sk + Ka +Le+ ++Y++sLq
  GSMUA_Achr1P27010_001  60 NSHSLAERIRREKISERMRLLQDLVPGC----SKINGKALMLEEIINYVQSLQ 108
                            58**************************....899*****************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000833.79E-1155112No hitNo description
SuperFamilySSF474591.83E-1655125IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.08557107IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.5E-1557123IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.9E-860108IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003538.9E-963113IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    Send to blast
MKSTNFYLFK AEEQHDVSFE SGKAATGKDG KEQKNEVKRG GNNHKNDCTH VRAKRGQATN  60
SHSLAERIRR EKISERMRLL QDLVPGCSKI NGKALMLEEI INYVQSLQRQ VEFLSMKLAT  120
VDPELNFDLD QTLSGDVHSC YGGSAVLAFG PGMSSFQPHL YESTSQRVTQ PEMFCTAPSP  180
GDLLQAFLSQ TNISQVRRSH FFAGLAWLSS YSPLIGLLTT VRRCMA
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009419444.11e-136PREDICTED: transcription factor bHLH49-like isoform X1
RefseqXP_009419437.11e-136PREDICTED: transcription factor bHLH49-like isoform X1
RefseqXP_009419432.11e-136PREDICTED: transcription factor bHLH49-like isoform X1
SwissprotQ9CAA94e-47BH049_ARATH; Transcription factor bHLH49
TrEMBLM0S3F81e-171M0S3F8_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr1P27010_0011e-171(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP60333650
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68920.22e-48bHLH family protein